PlantTFDB
Plant Transcription Factor Database
v4.0
Previous version: v3.0
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Lus10001347
Organism
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Malpighiales; Linaceae; Linum
Family bZIP
Protein Properties Length: 165aa    MW: 18341.6 Da    PI: 6.2538
Description bZIP family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Lus10001347genomeBGIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1bZIP_140.65.5e-133590560
                 CHHHCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH CS
       bZIP_1  5 krerrkqkNReAArrsRqRKkaeieeLeekvkeLeaeNkaLkkeleelkkevaklk 60
                 ++ +r+q+NRe+ArrsR RK++ ++ L   v +L + N++    ++  +++  +++
  Lus10001347 35 RKRKRMQSNRESARRSRMRKQKHMDDLMVQVSQLRKDNSQILTAINVTTQHFLNVE 90
                 6789***********************************99988887777766655 PP

Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
SMARTSM003381.5E-183195IPR004827Basic-leucine zipper domain
Gene3DG3DSA:1.20.5.1701.3E-103380No hitNo description
PROSITE profilePS5021710.2543396IPR004827Basic-leucine zipper domain
SuperFamilySSF579595.94E-123587No hitNo description
PfamPF001701.5E-103580IPR004827Basic-leucine zipper domain
CDDcd147023.67E-203686No hitNo description
PROSITE patternPS0003603853IPR004827Basic-leucine zipper domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0006355Biological Processregulation of transcription, DNA-templated
GO:0003700Molecular Functiontranscription factor activity, sequence-specific DNA binding
GO:0043565Molecular Functionsequence-specific DNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 165 aa     Download sequence    Send to blast
MASSSGNSSS PGGSSSVLLN SGSDEDLQQL VMEERKRKRM QSNRESARRS RMRKQKHMDD  60
LMVQVSQLRK DNSQILTAIN VTTQHFLNVE ADNSVLRAQI VELAHRLDSL TAILDFIGNG  120
SCSWETDQVV VVDCIQPAES FLNNPLNSIY LNQPIMASPN LFQY*
Nucleic Localization Signal ? help Back to Top
NLS
No. Start End Sequence
13455RKRKRMQSNRESARRSRMRKQK
24754RRSRMRKQ
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_011048821.12e-65PREDICTED: ocs element-binding factor 1-like
TrEMBLB9H4F35e-65B9H4F3_POPTR; BZIP transcription factor family protein
STRINGPOPTR_0005s25290.11e-64(Populus trichocarpa)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
FabidsOGEF61334147
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT1G75390.13e-45basic leucine-zipper 44